Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYA_1006Putative purine phosphoribosyltransferase; Identified by similarity to PDB:1HGX_A; match to protein family HMM PF00156. (170 aa)    
Predicted Functional Partners:
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
       0.558
thiO
Glycine oxidase ThiO; Identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352.
  
     0.522
CYA_0174
Conserved hypothetical protein; Identified by similarity to GB:BAD78799.1; match to protein family HMM TIGR02664.
  
     0.521
CYA_0069
Conserved hypothetical protein; Identified by similarity to PIR:AH1812.
  
     0.496
CYA_2000
Conserved hypothetical protein.
  
     0.482
CYA_2121
Conserved hypothetical protein; Identified by similarity to PIR:AB2162.
  
     0.426
CYA_0621
Conserved hypothetical protein; Identified by similarity to GB:BAD78799.1; match to protein family HMM TIGR02664.
  
     0.422
thiS
Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683.
  
     0.412
CYA_2213
Conserved hypothetical protein.
  
     0.408
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (12%) [HD]