Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
CYA_1066Conserved hypothetical protein; Identified by similarity to PIR:AD2089. (94 aa)    
Predicted Functional Partners:
CYA_1595
CO2 hydration protein; Identified by match to protein family HMM TIGR01964.
  
     0.772
CYA_0965
Conserved hypothetical protein.
  
     0.771
CYA_0205
CAB/ELIP/HLIP family protein.
  
     0.770
CYA_0454
Identified by match to protein family HMM TIGR02652.
  
     0.770
CYA_1833
Identified by match to protein family HMM PF06967.
  
     0.770
CYA_0898
Identified by match to protein family HMM PF06967.
  
     0.769
CYA_0867
Conserved hypothetical protein; Identified by similarity to GB:BAC10003.1.
  
     0.767
CYA_0570
Conserved hypothetical protein; Identified by similarity to GB:BAC09020.1.
  
     0.766
CYA_1704
Conserved hypothetical protein.
  
     0.764
CYA_0638
CO2 hydration protein; Identified by match to protein family HMM TIGR01964.
  
     0.763
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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