Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_1146Transporter, auxin efflux carrier (AEC) family; Identified by match to protein family HMM PF03547. (320 aa)    
Predicted Functional Partners:
CYA_0662
Malate dehydrogenase (oxaloacetate-decarboxylating); Identified by similarity to SP:P16468; match to protein family HMM PF00390; match to protein family HMM PF01842; match to protein family HMM PF03949.
  
  
 0.870
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.773
CYA_1149
Hypothetical protein; Identified by Glimmer2; putative.
       0.479
CYA_0160
Conserved hypothetical protein; Identified by similarity to PIR:AB2317.
 
    0.477
CYA_1150
Identified by match to protein family HMM PF00805.
       0.444
CYA_1984
Conserved domain protein; Identified by similarity to PIR:AH2164.
  
     0.436
CYA_0592
Conserved domain protein.
  
     0.423
CYA_1046
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.419
panE-1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
    0.408
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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