Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_1204Identified by match to protein family HMM PF01553. (247 aa)    
Predicted Functional Partners:
CYA_1202
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
 
 
 0.881
cobO-2
cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF02572.
  
    0.762
plsY
Conserved hypothetical protein TIGR00023; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
  
 
 0.580
cdsA
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
    
 0.562
CYA_2631
Putative phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
     
  0.500
CYA_1206
Putative cysteine synthase B; Identified by similarity to SP:P16703; match to protein family HMM PF00291; match to protein family HMM TIGR01136.
       0.483
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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