Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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CYA_1339Putative membrane protein; Identified by match to protein family HMM PF00892. (343 aa)    
Predicted Functional Partners:
CYA_2482
Conserved hypothetical protein.
  
     0.696
CYA_2070
Conserved hypothetical protein; Identified by similarity to GB:BAC08024.1.
  
     0.688
CYA_0813
Putative membrane proteinprotein; Identified by similarity to PIR:AH1843.
  
     0.685
CYA_0331
Ycf65-like protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.646
CYA_0056
Identified by match to protein family HMM PF05768.
  
     0.644
CYA_2892
Conserved hypothetical protein.
  
     0.637
CYA_1155
PRC-barrel domain protein; Identified by match to protein family HMM PF05239.
  
     0.636
CYA_2577
Conserved hypothetical protein.
  
     0.612
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
    0.554
CYA_2601
Ferredoxin-thioredoxin reductase, catalytic beta subunit; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.552
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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