Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYA_1563 | CYA_1564 | CYA_1563 | CYA_1564 | ABC1 domain protein; Identified by match to protein family HMM PF03109. | Conserved hypothetical protein. | 0.634 |
CYA_1563 | CYA_1567 | CYA_1563 | CYA_1567 | ABC1 domain protein; Identified by match to protein family HMM PF03109. | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.403 |
CYA_1563 | glgC | CYA_1563 | CYA_1562 | ABC1 domain protein; Identified by match to protein family HMM PF03109. | Glucose-1-phosphate adenylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.473 |
CYA_1564 | CYA_1563 | CYA_1564 | CYA_1563 | Conserved hypothetical protein. | ABC1 domain protein; Identified by match to protein family HMM PF03109. | 0.634 |
CYA_1564 | CYA_1567 | CYA_1564 | CYA_1567 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | 0.471 |
CYA_1567 | CYA_1563 | CYA_1567 | CYA_1563 | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | ABC1 domain protein; Identified by match to protein family HMM PF03109. | 0.403 |
CYA_1567 | CYA_1564 | CYA_1567 | CYA_1564 | Identified by match to protein family HMM PF01979; match to protein family HMM PF07969. | Conserved hypothetical protein. | 0.471 |
glgC | CYA_1563 | CYA_1562 | CYA_1563 | Glucose-1-phosphate adenylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | ABC1 domain protein; Identified by match to protein family HMM PF03109. | 0.473 |