Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
codACytosine deaminase; Identified by similarity to SP:P25524; match to protein family HMM PF01979; match to protein family HMM PF07969. (424 aa)    
Predicted Functional Partners:
CYA_1567
Identified by match to protein family HMM PF01979; match to protein family HMM PF07969.
  
  
 
0.927
upp
Uracil phosphoribosyltransferase; Identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; Belongs to the UPRTase family.
  
 
 0.918
CYA_1538
Creatininase; Identified by match to protein family HMM PF02633.
    
 0.905
pyrR
pyrR bifunctional protein; Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines.
     
 0.900
CYA_1791
Putative hydantoin utilization protein A; Identified by similarity to SP:Q01262; match to protein family HMM PF01968; match to protein family HMM PF05378.
     
  0.900
CYA_2800
Putative hydantoin utilization protein B; Identified by match to protein family HMM PF02538.
     
  0.900
CYA_1584
Tat (twin-arginine translocation) pathway signal sequence/basic membrane protein; Identified by match to protein family HMM PF02608; match to protein family HMM TIGR01409.
 
     0.743
CYA_1585
ISSoc1, transposase; Identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766.
       0.596
panC/cmk
Pantoate--beta-alanine ligase/cytidylate kinase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the C-terminal section; belongs to the cytidylate kinase family. Type 1 subfamily.
  
  
 0.502
CYA_1581
Carbohydrate ABC transporter-2 (CUT2) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
     0.400
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.