Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CYA_1668Conserved hypothetical protein; Identified by similarity to GB:BAD78557.1. (227 aa)    
Predicted Functional Partners:
CYA_0431
Conserved hypothetical protein.
  
     0.759
psbZ
Conserved hypothetical protein; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna; Belongs to the PsbZ family.
  
     0.697
CYA_2530
Conserved hypothetical protein.
  
     0.676
CYA_0588
WD40-like beta propeller repeat protein; Identified by match to protein family HMM PF07676.
  
     0.615
CYA_2565
Conserved hypothetical protein.
  
     0.588
CYA_0660
Conserved hypothetical protein.
  
     0.586
CYA_1617
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.580
CYA_2294
Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992.
  
     0.575
cpcS1
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.567
CYA_0964
Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
  
     0.564
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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