Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYA_1872Hypothetical protein; Identified by Glimmer2; putative. (105 aa)    
Predicted Functional Partners:
CYA_1873
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
CYA_2211
Conserved hypothetical protein.
  
     0.678
CYA_0029
Peptidase, M48B family; Identified by match to protein family HMM PF01435.
  
     0.567
CYA_1870
Conserved hypothetical protein; Identified by similarity to GB:BAC89517.1.
       0.546
CYA_1494
Sensor histidine kinase; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518.
  
     0.543
CYA_1536
Conserved domain protein.
  
     0.505
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.502
CYA_2866
Conserved hypothetical protein; Identified by similarity to GB:BAC09541.1.
  
     0.479
CYA_0881
CRISPR-associated RAMP protein; Identified by match to protein family HMM PF03787.
  
     0.450
CYA_0598
Conserved domain protein.
  
     0.448
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.