Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_1931Fatty acid desaturase; Identified by similarity to GB:AAF78203.1; match to protein family HMM PF00487. (324 aa)    
Predicted Functional Partners:
CYA_1571
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266.
   
 
 0.953
CYA_0185
Oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
   
 
 0.934
psb27
Putative photosystem II protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.747
CYA_2121
Conserved hypothetical protein; Identified by similarity to PIR:AB2162.
  
     0.733
pds
Phytoene desaturase; Identified by similarity to SP:P26294; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02731.
  
   
 0.684
CYA_0813
Putative membrane proteinprotein; Identified by similarity to PIR:AH1843.
  
     0.675
pcxA
CemA family protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the Cema family.
  
     0.669
CYA_0162
Conserved hypothetical protein; Identified by similarity to PIR:AB2066.
  
     0.660
CYA_1793
Conserved hypothetical protein.
  
     0.660
CYA_0394
Conserved hypothetical protein.
  
     0.650
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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