STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_1979Conserved hypothetical protein; Identified by similarity to GB:BAC91746.1; match to protein family HMM PF06868. (124 aa)    
Predicted Functional Partners:
CYA_1570
ATPase, AAA family; Identified by match to protein family HMM PF00004.
 
   
 0.749
CYA_0343
Identified by match to protein family HMM PF00012; Belongs to the heat shock protein 70 family.
  
     0.725
CYA_0283
ATPase, AAA family; Identified by match to protein family HMM PF00004.
 
   
 0.719
CYA_0342
Conserved hypothetical protein; Identified by similarity to GB:BAC91744.1.
  
     0.718
CYA_1980
Identified by match to protein family HMM PF00805.
       0.701
CYA_0824
Conserved hypothetical protein.
  
     0.642
CYA_2301
Conserved hypothetical protein.
  
     0.634
CYA_0868
Conserved hypothetical protein; Identified by similarity to PIR:AB2198.
  
     0.604
CYA_0426
Conserved hypothetical protein.
  
     0.589
CYA_0313
ATPase, AAA family; Identified by match to protein family HMM PF00004.
 
   
 0.558
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.