STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_2029Iron chelate ABC transporter (FeCT) family, substrate-binding protein; Identified by match to protein family HMM PF01497. (290 aa)    
Predicted Functional Partners:
CYA_2033
Iron chelate uptake ABC transporter (FeCT) family, permease protein; Identified by similarity to SP:P15029; match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.990
CYA_2032
Iron chelate ABC transporter (FeCT) family, ATP-binding protein; Identified by similarity to SP:P15031; match to protein family HMM PF00005.
 
 
 0.987
CYA_2031
Transporter, TonB-dependent heme/hemoglobin receptor family; Identified by similarity to GB:AAC27029.1; match to protein family HMM PF00593; match to protein family HMM PF07715; match to protein family HMM TIGR01785; match to protein family HMM TIGR01786.
 
  
 0.888
CYA_2030
TonB family protein; Identified by similarity to GB:AAF04082.1; match to protein family HMM PF03544; match to protein family HMM TIGR01352.
  
  
 0.721
CYA_1855
Metal chelate ABC transporter, metal chelate-binding protein; Identified by match to protein family HMM PF01497.
  
     0.699
CYA_0144
Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243.
 
    0.575
CYA_1026
Transporter, lead (Pb2+) uptake porter (PbrT) family; Identified by similarity to GB:CAC28871.1; match to protein family HMM PF03239.
   
  
 0.558
CYA_0533
Conserved hypothetical protein; Identified by similarity to PIR:S75241.
 
    0.551
CYA_1108
Transporter, outer membrane receptor (OMR) family; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
 
  
 0.516
CYA_2693
Conserved hypothetical protein; Identified by similarity to PIR:AD2030.
 
   
 0.488
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.