cpcE-2 protein (Synechococcus sp. JA33Ab) - STRING interaction network

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Score

cpcE-2

Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130. (275 aa)

Predicted Functional Partners:

cpcF

0.971

cpcC

0.952

cpcE-1

0.910

cpcA-2

0.878

cpcB-2

0.854

apcC

0.852

apcB-2

0.852

apcA

0.852

apcD

0.851

cpcT1

0.849

Your Current Organism:

Synechococcus sp. JA33Ab

NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
apcA	apcB-2	CYA_2227	CYA_2226	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	0.992
apcA	apcC	CYA_2227	CYA_2225	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	0.996
apcA	apcD	CYA_2227	CYA_2790	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	0.946
apcA	cpcA-2	CYA_2227	CYA_2042	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.914
apcA	cpcB-2	CYA_2227	CYA_2043	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin, beta subunit; Identified by similarity to SP:P07120; match to protein family HMM PF00502.	0.907
apcA	cpcC	CYA_2227	CYA_2041	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P11398; match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	0.992
apcA	cpcE-1	CYA_2227	CYA_0217	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.839
apcA	cpcE-2	CYA_2227	CYA_2040	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.852
apcA	cpcF	CYA_2227	CYA_0216	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.852
apcA	cpcT1	CYA_2227	CYA_0661	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.802
apcB-2	apcA	CYA_2226	CYA_2227	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Allophycocyanin, alpha subunit; Identified by match to protein family HMM PF00502.	0.992
apcB-2	apcC	CYA_2226	CYA_2225	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.	0.997
apcB-2	apcD	CYA_2226	CYA_2790	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Allophycocyanin alpha, B subunit; Identified by similarity to SP:P80556; match to protein family HMM PF00502.	0.961
apcB-2	cpcA-2	CYA_2226	CYA_2042	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502; match to protein family HMM TIGR01338.	0.916
apcB-2	cpcB-2	CYA_2226	CYA_2043	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin, beta subunit; Identified by similarity to SP:P07120; match to protein family HMM PF00502.	0.900
apcB-2	cpcC	CYA_2226	CYA_2041	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P11398; match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.	0.992
apcB-2	cpcE-1	CYA_2226	CYA_0217	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.801
apcB-2	cpcE-2	CYA_2226	CYA_2040	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.	0.852
apcB-2	cpcF	CYA_2226	CYA_0216	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.848
apcB-2	cpcT1	CYA_2226	CYA_0661	Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.	Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.	0.835

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