Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CYA_2061 | CYA_2063 | CYA_2061 | CYA_2063 | Putative peptidase TldD; Member of MEROPS family U62, which contains contains microcin-processing peptidases of unknown catalytic mechanism; identified by similarity to SP:P46473; match to protein family HMM PF01523. | ISSoc3, orfB transposase; Identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766. | 0.508 |
| CYA_2061 | glgB | CYA_2061 | CYA_2062 | Putative peptidase TldD; Member of MEROPS family U62, which contains contains microcin-processing peptidases of unknown catalytic mechanism; identified by similarity to SP:P46473; match to protein family HMM PF01523. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.701 |
| CYA_2063 | CYA_2061 | CYA_2063 | CYA_2061 | ISSoc3, orfB transposase; Identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766. | Putative peptidase TldD; Member of MEROPS family U62, which contains contains microcin-processing peptidases of unknown catalytic mechanism; identified by similarity to SP:P46473; match to protein family HMM PF01523. | 0.508 |
| CYA_2063 | glgB | CYA_2063 | CYA_2062 | ISSoc3, orfB transposase; Identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.556 |
| glgB | CYA_2061 | CYA_2062 | CYA_2061 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Putative peptidase TldD; Member of MEROPS family U62, which contains contains microcin-processing peptidases of unknown catalytic mechanism; identified by similarity to SP:P46473; match to protein family HMM PF01523. | 0.701 |
| glgB | CYA_2063 | CYA_2062 | CYA_2063 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | ISSoc3, orfB transposase; Identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766. | 0.556 |