STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_2121Conserved hypothetical protein; Identified by similarity to PIR:AB2162. (195 aa)    
Predicted Functional Partners:
CYA_2122
Conserved hypothetical protein.
 
     0.824
psb27
Putative photosystem II protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.774
CYA_1793
Conserved hypothetical protein.
  
     0.772
CYA_2000
Conserved hypothetical protein.
  
     0.769
CYA_1061
Conserved hypothetical protein.
  
     0.766
CYA_0069
Conserved hypothetical protein; Identified by similarity to PIR:AH1812.
  
     0.765
CYA_1704
Conserved hypothetical protein.
  
     0.765
CYA_2195
Transcriptional regulator, AbrB family; Identified by match to protein family HMM TIGR01439.
  
     0.760
CYA_0162
Conserved hypothetical protein; Identified by similarity to PIR:AB2066.
  
     0.758
CYA_0867
Conserved hypothetical protein; Identified by similarity to GB:BAC10003.1.
  
     0.753
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: medium (76%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.