Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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CYA_2147GTP-binding domain protein; Identified by match to protein family HMM PF01926. (507 aa)    
Predicted Functional Partners:
psb27
Putative photosystem II protein; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.631
CYA_2121
Conserved hypothetical protein; Identified by similarity to PIR:AB2162.
  
     0.619
CYA_1793
Conserved hypothetical protein.
  
     0.563
CYA_2151
Phospholipase D/competence protein ComEA helix-hairpin-helix domain protein; Identified by match to protein family HMM PF00614; match to protein family HMM PF00633; match to protein family HMM TIGR00426.
 
 
 0.520
CYA_0162
Conserved hypothetical protein; Identified by similarity to PIR:AB2066.
  
     0.483
CYA_2656
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
  
 0.468
CYA_1061
Conserved hypothetical protein.
  
     0.464
CYA_2405
Putative adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00498.
    
 
 0.440
CYA_2148
Hypothetical protein; Identified by Glimmer2; putative.
       0.436
CYA_2149
Hypothetical protein; Identified by Glimmer2; putative.
       0.436
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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