Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
copCDCopper resistance protein C/D; Identified by match to protein family HMM PF04234. (538 aa)    
Predicted Functional Partners:
CYA_2332
Nuclear export factor GLE1-like protein; Identified by match to protein family HMM PF07987.
 
  
 0.999
CYA_2758
Oxidoreductase, FAD-dependent; Identified by match to protein family HMM PF01266; match to protein family HMM PF07992.
    
   0.727
CYA_2371
Copper metallochaperone; Identified by similarity to PDB:1SB6_A.
     
 0.650
pheA
Prephenate dehydratase; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842.
     
 0.590
petJ
Cytochrome c6; Identified by similarity to SP:P28596; match to protein family HMM PF00034.
       0.589
CYA_2331
Conserved hypothetical protein.
       0.589
CYA_1717
Transporter, arsenical resistance-3 (ACR3) family; Identified by match to protein family HMM PF01758; match to protein family HMM TIGR00832.
      
 0.555
CYA_2277
Conserved hypothetical protein; Identified by similarity to PIR:S76074; match to protein family HMM PF02583.
     
 0.502
CYA_2372
Copper-translocating P-type ATPase; Identified by similarity to SP:P37279; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
     
 0.488
CYA_2871
Copper-translocating P-type ATPase; Identified by similarity to SP:P37279; similarity to SP:P37385; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
     
 0.488
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.