STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_2371Copper metallochaperone; Identified by similarity to PDB:1SB6_A. (64 aa)    
Predicted Functional Partners:
CYA_2372
Copper-translocating P-type ATPase; Identified by similarity to SP:P37279; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
  
 
 0.928
CYA_2871
Copper-translocating P-type ATPase; Identified by similarity to SP:P37279; similarity to SP:P37385; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
  
 
 0.859
CYA_0248
Transcriptional regulator, BlaI/MecI/CopY family; Identified by match to protein family HMM PF03965.
  
  
 0.775
CYA_2160
CheW domain protein; Identified by match to protein family HMM PF01584.
  
     0.711
CYA_0382
Conserved hypothetical protein; Identified by similarity to PIR:AI2167.
  
     0.698
CYA_2562
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.644
CYA_0052
Conserved hypothetical protein; Identified by similarity to PIR:AE2426.
  
     0.609
CYA_0290
Conserved hypothetical protein; Identified by similarity to GB:BAD80164.1.
  
     0.604
CYA_1110
Identified by similarity to GB:BAC08389.1; match to protein family HMM PF00805.
 
   
 0.594
copCD
Copper resistance protein C/D; Identified by match to protein family HMM PF04234.
     
 0.589
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.