Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
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Score
CYA_2434Carbohydrate uptake ABC transporter-2 (CUT2) family, ATP-binding protein, internal deletion. (112 aa)    
Predicted Functional Partners:
CYA_1581
Carbohydrate ABC transporter-2 (CUT2) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.896
CYA_1582
Carbohydrate ABC transporter-2 (CUT2) family, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.896
CYA_1584
Tat (twin-arginine translocation) pathway signal sequence/basic membrane protein; Identified by match to protein family HMM PF02608; match to protein family HMM TIGR01409.
 
  
 0.811
CYA_1919
Carbohydrate uptake ABC transporter 2 (CUT2) family, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.773
CYA_2888
Sugar ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
     0.771
CYA_2435
Identified by match to protein family HMM PF03069.
       0.709
thrS
threonyl-tRNA synthetase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.645
CYA_2432
Putative exopolyphosphatase; Identified by similarity to GB:AAD29107.1; match to protein family HMM PF01966; match to protein family HMM PF02541.
       0.433
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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