Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
CYA_2464Dps protein; Identified by similarity to SP:Q55024; match to protein family HMM PF00210; Belongs to the Dps family. (183 aa)    
Predicted Functional Partners:
CYA_2463
Conserved hypothetical protein; Identified by similarity to PIR:AB1982.
 
     0.798
CYA_2462
Putative iron-sulfur cluster-binding protein; Identified by similarity to PIR:JC7085.
 
     0.691
cpcD
Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383.
  
     0.585
CYA_2488
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.582
CYA_1830
Conserved hypothetical protein.
 
     0.568
clpS-2
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.557
clpS-1
ATP-dependent Clp protease adaptor protein ClpS; Identified by match to protein family HMM PF02617; Belongs to the ClpS family.
   
   0.520
yfiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
    0.516
dps
Dps protein; Identified by similarity to PDB:1O9R_A; match to protein family HMM PF00210; Belongs to the Dps family.
  
     0.511
CYA_2465
Identified by match to protein family HMM PF01926.
       0.455
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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