Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_2533Fe-S metabolism protein, SufE family; Identified by match to protein family HMM PF02657. (147 aa)    
Predicted Functional Partners:
CYA_0391
Cysteine desulfurase, SufS family; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.812
CYA_2531
Manganese/zinc/iron chelate ABC ransporter (MZT) family, ATP-binding protein; Identified by similarity to SP:Q55281; match to protein family HMM PF00005.
       0.752
CYA_2532
Putative zinc ABC transporter, zinc-binding protein; Identified by similarity to PDB:1PQ4_A; match to protein family HMM PF01297; Belongs to the bacterial solute-binding protein 9 family.
       0.752
CYA_2529
Manganese/zinc/iron chelate ABC transporter (MZT) family, permease protein; Identified by similarity to SP:P39832; match to protein family HMM PF00950.
       0.751
sufC
FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978.
 
 
 0.669
cefD
Isopenicillin N-epimerase; Identified by similarity to SP:Q03046; match to protein family HMM PF00266.
  
 
 0.641
sufB
FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980.
 
 
 0.635
sufD
FeS assembly protein SufD; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981.
 
 
 0.598
CYA_2534
Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353.
       0.515
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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