STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYA_2601Ferredoxin-thioredoxin reductase, catalytic beta subunit; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. (117 aa)    
Predicted Functional Partners:
CYA_2750
Ferredoxin-thioredoxin reductase, variable subunit; Identified by similarity to SP:P24018; match to protein family HMM PF02941.
  
 
 
 0.935
CYA_0694
Conserved hypothetical protein.
  
     0.766
CYA_0712
Conserved hypothetical protein; Identified by similarity to PIR:AF2149.
  
     0.765
CYA_0383
Conserved hypothetical protein; Identified by similarity to PIR:S75306; match to protein family HMM PF07082.
  
     0.761
CYA_1247
Conserved hypothetical protein; Identified by match to protein family HMM PF06485.
  
    0.761
CYA_0014
Identified by match to protein family HMM PF05419.
  
     0.759
psbW
Photosystem II reaction center protein PsbW; Identified by similarity to SP:Q55356; match to protein family HMM PF03912; Belongs to the Psb28 family.
  
     0.759
CYA_0331
Ycf65-like protein; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.755
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
  
 0.754
CYA_1426
Ferredoxin, 2Fe-2S; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR02008.
   
   0.754
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.