CYA_2652 protein (Synechococcus sp. JA33Ab) - STRING interaction network

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Score

CYA_2652

PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130. (280 aa)

Predicted Functional Partners:

efp

0.819

CYA_2651

0.680

CYA_1945

0.662

CYA_2656

0.650

CYA_1255

0.639

CYA_2049

0.621

rplJ

0.618

CYA_2649

0.594

alaS

0.591

CYA_2836

0.563

Your Current Organism:

Synechococcus sp. JA33Ab

NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYA_1255	CYA_2652	CYA_1255	CYA_2652	Hypothetical protein; Identified by Glimmer2; putative.	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.639
CYA_1255	CYA_2656	CYA_1255	CYA_2656	Hypothetical protein; Identified by Glimmer2; putative.	Ankyrin repeat protein; Identified by match to protein family HMM PF00023.	0.961
CYA_1255	CYA_2836	CYA_1255	CYA_2836	Hypothetical protein; Identified by Glimmer2; putative.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229.	0.712
CYA_1945	CYA_2652	CYA_1945	CYA_2652	GTPase family protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.662
CYA_1945	rplJ	CYA_1945	CYA_1782	GTPase family protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.880
CYA_2049	CYA_2651	CYA_2049	CYA_2651	Identified by match to protein family HMM PF00753.	TPR repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.439
CYA_2049	CYA_2652	CYA_2049	CYA_2652	Identified by match to protein family HMM PF00753.	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.621
CYA_2649	CYA_2651	CYA_2649	CYA_2651	Putative methyltransferase; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095.	TPR repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.773
CYA_2649	CYA_2652	CYA_2649	CYA_2652	Putative methyltransferase; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095.	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.594
CYA_2651	CYA_2049	CYA_2651	CYA_2049	TPR repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Identified by match to protein family HMM PF00753.	0.439
CYA_2651	CYA_2649	CYA_2651	CYA_2649	TPR repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	Putative methyltransferase; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095.	0.773
CYA_2651	CYA_2652	CYA_2651	CYA_2652	TPR repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	0.680
CYA_2652	CYA_1255	CYA_2652	CYA_1255	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	Hypothetical protein; Identified by Glimmer2; putative.	0.639
CYA_2652	CYA_1945	CYA_2652	CYA_1945	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	GTPase family protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.662
CYA_2652	CYA_2049	CYA_2652	CYA_2049	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	Identified by match to protein family HMM PF00753.	0.621
CYA_2652	CYA_2649	CYA_2652	CYA_2649	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	Putative methyltransferase; Identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095.	0.594
CYA_2652	CYA_2651	CYA_2652	CYA_2651	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	TPR repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.	0.680
CYA_2652	CYA_2656	CYA_2652	CYA_2656	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	Ankyrin repeat protein; Identified by match to protein family HMM PF00023.	0.650
CYA_2652	CYA_2836	CYA_2652	CYA_2836	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229.	0.563
CYA_2652	alaS	CYA_2652	CYA_1881	PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.	alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.	0.591

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