Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_2736Conserved hypothetical protein; Identified by similarity to PIR:AI1923; match to protein family HMM PF02325. (94 aa)    
Predicted Functional Partners:
psbO
Photosystem II manganese-stabilizing protein; Identified by similarity to SP:P55221; match to protein family HMM PF01716.
  
    0.771
sepF
Conserved hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
  
 0.768
CYA_1247
Conserved hypothetical protein; Identified by match to protein family HMM PF06485.
  
    0.768
psaF
Photosystem I reaction center subunit III; Identified by similarity to SP:P25899; match to protein family HMM PF02507.
  
    0.766
psbW
Photosystem II reaction center protein PsbW; Identified by similarity to SP:Q55356; match to protein family HMM PF03912; Belongs to the Psb28 family.
  
     0.764
psaL-2
Photosystem I reaction center subunit XI; Identified by match to protein family HMM PF02605.
  
     0.761
CYA_0848
BNR/Asp-box repeat protein; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.
  
     0.758
CYA_2399
Conserved hypothetical protein; Identified by similarity to GB:BAD78649.1.
  
     0.757
CYA_0121
Conserved hypothetical protein; Identified by similarity to GB:BAD78811.1.
  
     0.756
CYA_0122
Conserved hypothetical protein; Identified by similarity to PIR:AD2369.
  
     0.754
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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