Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CYA_0212 | CYA_2405 | Identified by match to protein family HMM PF00481. | Putative adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00498. | 0.506 |
CYA_0212 | CYA_2756 | Identified by match to protein family HMM PF00481. | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | 0.839 |
CYA_0212 | CYA_2836 | Identified by match to protein family HMM PF00481. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229. | 0.510 |
CYA_2405 | CYA_0212 | Putative adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00498. | Identified by match to protein family HMM PF00481. | 0.506 |
CYA_2405 | CYA_2756 | Putative adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00498. | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | 0.470 |
CYA_2405 | CYA_2836 | Putative adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00498. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229. | 0.853 |
CYA_2755 | CYA_2756 | Peptidase, S1C (protease Do) family; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595. | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | 0.401 |
CYA_2756 | CYA_0212 | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | Identified by match to protein family HMM PF00481. | 0.839 |
CYA_2756 | CYA_2405 | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | Putative adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00498. | 0.470 |
CYA_2756 | CYA_2755 | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | Peptidase, S1C (protease Do) family; Identified by match to protein family HMM PF00089; match to protein family HMM PF00595. | 0.401 |
CYA_2756 | CYA_2836 | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229. | 0.479 |
CYA_2836 | CYA_0212 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229. | Identified by match to protein family HMM PF00481. | 0.510 |
CYA_2836 | CYA_2405 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229. | Putative adenylate cyclase; Identified by match to protein family HMM PF00211; match to protein family HMM PF00498. | 0.853 |
CYA_2836 | CYA_2756 | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229. | Protein kinase; Identified by match to protein family HMM PF00069; match to protein family HMM PF05419. | 0.479 |