Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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Score
CYA_2789Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit-like protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130. (226 aa)    
Predicted Functional Partners:
cpcE-1
Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
  
   
 0.800
cpcE-2
Phycocyanin alpha subunit phycocyanobilin lyase, CpcE subunit; Identified by match to protein family HMM PF03130.
  
   
 0.761
CYA_0113
PBS lyase HEAT-like repeat protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
  
     0.715
cpcF
Phycocyanin alpha subunit phycocyanobilin lyase, CpcF subunit; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130.
  
   
 0.701
cpcA-1
Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502.
  
   
 0.623
CYA_0528
Putative phycobilisome linker polypeptide; Identified by match to protein family HMM PF00427; Belongs to the phycobilisome linker protein family.
  
   
 0.620
cpcA-2
Phycocyanin, alpha subunit; Identified by similarity to SP:P07121; match to protein family HMM PF00502; match to protein family HMM TIGR01338.
  
   
 0.618
apcC
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.615
cpcC
Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P11398; match to protein family HMM PF00427; match to protein family HMM PF01383; Belongs to the phycobilisome linker protein family.
  
   
 0.610
apcB-1
Allophycocyanin, beta subunit; Identified by match to protein family HMM PF00502; match to protein family HMM TIGR01337.
  
   
 0.609
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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