Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_2834CAB/ELIP/HLIP family protein. (56 aa)    
Predicted Functional Partners:
CYA_1384
Conserved hypothetical protein; Identified by similarity to GB:BAC09596.1.
  
     0.762
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.749
CYA_2399
Conserved hypothetical protein; Identified by similarity to GB:BAD78649.1.
  
     0.730
CYA_0162
Conserved hypothetical protein; Identified by similarity to PIR:AB2066.
  
     0.719
CYA_0635
Conserved hypothetical protein; Identified by similarity to GB:BAC09136.1.
  
     0.718
CYA_2335
Conserved hypothetical protein; Identified by similarity to PIR:AF2318.
  
     0.714
CYA_1608
Conserved hypothetical protein.
  
     0.705
petG
Cytochrome b6-f complex, subunit V; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.
  
     0.699
CYA_0059
Conserved hypothetical protein.
  
     0.685
CYA_2630
Identified by match to protein family HMM PF00034.
  
     0.652
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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