CYA_2836 protein (Synechococcus sp. JA33Ab) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Score

CYA_2836

Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229. (1523 aa)

Predicted Functional Partners:

CYA_1657

0.999

CYA_2155

0.999

CYA_2742

0.998

CYA_0840

0.992

CYA_2618

0.992

CYA_2727

0.991

CYA_2885

0.989

CYA_2312

0.988

CYA_2737

0.988

CYA_0479

0.987

Your Current Organism:

Synechococcus sp. JA33Ab

NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
CYA_0479	CYA_0840	Response regulator; Identified by match to protein family HMM PF00072.	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	0.946
CYA_0479	CYA_1657	Response regulator; Identified by match to protein family HMM PF00072.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.959
CYA_0479	CYA_2155	Response regulator; Identified by match to protein family HMM PF00072.	Sensor histindine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518.	0.896
CYA_0479	CYA_2742	Response regulator; Identified by match to protein family HMM PF00072.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.	0.690
CYA_0479	CYA_2836	Response regulator; Identified by match to protein family HMM PF00072.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229.	0.987
CYA_0479	CYA_2885	Response regulator; Identified by match to protein family HMM PF00072.	Response regulator; Identified by match to protein family HMM PF00072.	0.772
CYA_0840	CYA_0479	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Response regulator; Identified by match to protein family HMM PF00072.	0.946
CYA_0840	CYA_1657	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	0.967
CYA_0840	CYA_2155	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Sensor histindine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518.	0.975
CYA_0840	CYA_2312	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Response regulator; Identified by match to protein family HMM PF00072.	0.605
CYA_0840	CYA_2618	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.760
CYA_0840	CYA_2727	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00990; match to protein family HMM TIGR00254.	0.854
CYA_0840	CYA_2737	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Response regulator; Identified by match to protein family HMM PF00072.	0.721
CYA_0840	CYA_2742	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF02895.	0.895
CYA_0840	CYA_2836	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF05227; match to protein family HMM TIGR00229.	0.992
CYA_0840	CYA_2885	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	Response regulator; Identified by match to protein family HMM PF00072.	0.937
CYA_1657	CYA_0479	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Response regulator; Identified by match to protein family HMM PF00072.	0.959
CYA_1657	CYA_0840	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensor histidine kinase; Identified by match to protein family HMM PF02518.	0.967
CYA_1657	CYA_2155	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Sensor histindine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01584; match to protein family HMM PF01627; match to protein family HMM PF02518.	0.993
CYA_1657	CYA_2312	Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.	Response regulator; Identified by match to protein family HMM PF00072.	0.514

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