Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CYA_2854Polysaccharide pyruvyl transferase; Identified by match to protein family HMM PF04230. (359 aa)    
Predicted Functional Partners:
CYA_0146
Glycosyl transferase, WecB/TagA/CpsF family; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family.
   
 0.915
CYA_1228
Putative S-layer protein; Identified by match to protein family HMM PF00395.
  
     0.771
CYA_1077
Putative cell envelope-related function transcriptional attenuator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350.
 
   
 0.766
CYA_0975
Putative S-layer protein; Identified by match to protein family HMM PF00395.
  
     0.765
CYA_1470
Conserved domain protein.
 
     0.696
CYA_0239
Bacterial sugar transferase family protein; Identified by match to protein family HMM PF02397.
  
  
 0.655
CYA_1235
Putative lipoprotein.
  
     0.650
CYA_2016
Glycosyl transferase, group 4 family protein; Identified by match to protein family HMM PF00953.
 
   
 0.641
CYA_1509
Putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein; Identified by match to protein family HMM PF04932.
 
     0.604
CYA_1412
Putative S-layer protein; Identified by match to protein family HMM PF00395; Belongs to the OprB family.
  
     0.599
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
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