Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYA_2889TM2 domain protein; Identified by match to protein family HMM PF05154. (1554 aa)    
Predicted Functional Partners:
CYA_0367
Identified by match to protein family HMM PF00903.
  
     0.736
CYA_1832
Conserved hypothetical protein.
  
     0.732
CYA_2196
Conserved hypothetical protein; Identified by similarity to PIR:AD2437.
  
     0.639
CYA_2294
Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992.
  
     0.624
CYA_1487
Conserved hypothetical protein.
  
     0.591
CYA_0966
Transcriptional regulator, Crp/Fnr family; Identified by match to protein family HMM PF00325.
  
     0.580
cpcD
Phycobilisome 8.9 kDa linker polypeptide, phycocyanin-associated, rod; Identified by similarity to SP:P31966; match to protein family HMM PF01383.
  
     0.553
CYA_2774
Putative cyclase/dehydrase; Identified by match to protein family HMM PF03364.
  
     0.538
rodA
Putative rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
       0.538
CYA_2463
Conserved hypothetical protein; Identified by similarity to PIR:AB1982.
  
     0.512
Your Current Organism:
Synechococcus sp. JA33Ab
NCBI taxonomy Id: 321327
Other names: Cyanobacteria bacterium Yellowstone A-Prime, S. sp. JA-3-3Ab, Synechococcus sp. JA-3-3Ab, Synechococcus sp. OS-type A str. JA-3-3Ab, Synechococcus sp. OS-type A strain JA-3-3Ab
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.