STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB_1292Conserved hypothetical protein; Identified by similarity to PIR:AH2105; match to protein family HMM PF05685. (232 aa)    
Predicted Functional Partners:
CYB_0838
Conserved hypothetical protein; Identified by similarity to PIR:S74784.
  
     0.722
CYB_1125
Conserved hypothetical protein.
  
     0.705
CYB_2409
Conserved hypothetical protein, interruption-C.
  
     0.688
CYB_0135
Conserved hypothetical protein; Identified by similarity to GB:BAD01852.1.
  
     0.686
CYB_2017
Conserved hypothetical protein; Identified by similarity to PIR:AE2433; match to protein family HMM PF05685.
  
     0.681
CYB_0591
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.675
CYB_1771
Conserved hypothetical protein; Identified by similarity to PIR:AI1986; match to protein family HMM PF05685.
  
     0.672
CYB_1775
Conserved hypothetical protein; Identified by similarity to PIR:AD2294; match to protein family HMM PF05685.
  
     0.638
CYB_1728
Conserved hypothetical protein; Identified by match to protein family HMM PF05685.
  
     0.634
CYB_1919
Conserved hypothetical protein; Identified by similarity to PIR:AD2294; match to protein family HMM PF05685.
  
     0.624
Your Current Organism:
Synechococcus sp. JA23Ba
NCBI taxonomy Id: 321332
Other names: Cyanobacteria bacterium Yellowstone B-Prime, S. sp. JA-2-3B'a(2-13), Synechococcus sp. JA-2-3B'a(2-13)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.