CYB_1663 protein (Synechococcus sp. JA23Ba) - STRING interaction network

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Score

CYB_1663

Identified by match to protein family HMM PF00436. (132 aa)

Predicted Functional Partners:

CYB_0117

0.958

rpsF

0.908

dnaX

0.810

dnaE

0.805

priA

0.743

polA

0.737

CYB_0265

0.735

dnaB

0.724

CYB_2756

0.722

rplU

0.717

Your Current Organism:

Synechococcus sp. JA23Ba

NCBI taxonomy Id: 321332
Other names: Cyanobacteria bacterium Yellowstone B-Prime, S. sp. JA-2-3B'a(2-13), Synechococcus sp. JA-2-3B'a(2-13)

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYB_0117	CYB_1663	CYB_0117	CYB_1663	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	Identified by match to protein family HMM PF00436.	0.958
CYB_0117	CYB_2756	CYB_0117	CYB_2756	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	Phospholipase D/competence protein ComEA helix-hairpin-helix domain protein; Identified by match to protein family HMM PF00614; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.621
CYB_0117	dnaB	CYB_0117	CYB_1081	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	0.778
CYB_0117	dnaE	CYB_0117	CYB_1183	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	DNA polymerase III, alpha subunit; Identified by similarity to SP:O34623; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.805
CYB_0117	dnaX	CYB_0117	CYB_1304	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.810
CYB_0117	polA	CYB_0117	CYB_0126	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.814
CYB_0117	priA	CYB_0117	CYB_2227	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.	0.866
CYB_0117	rplU	CYB_0117	CYB_0742	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.765
CYB_0117	rpsF	CYB_0117	CYB_1664	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.795
CYB_0265	CYB_1663	CYB_0265	CYB_1663	Conserved hypothetical protein; Identified by similarity to PIR:AF2018.	Identified by match to protein family HMM PF00436.	0.735
CYB_1663	CYB_0117	CYB_1663	CYB_0117	Identified by match to protein family HMM PF00436.	Putative single-strand binding protein; Identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621.	0.958
CYB_1663	CYB_0265	CYB_1663	CYB_0265	Identified by match to protein family HMM PF00436.	Conserved hypothetical protein; Identified by similarity to PIR:AF2018.	0.735
CYB_1663	CYB_2756	CYB_1663	CYB_2756	Identified by match to protein family HMM PF00436.	Phospholipase D/competence protein ComEA helix-hairpin-helix domain protein; Identified by match to protein family HMM PF00614; match to protein family HMM PF00633; match to protein family HMM TIGR00426.	0.722
CYB_1663	dnaB	CYB_1663	CYB_1081	Identified by match to protein family HMM PF00436.	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	0.724
CYB_1663	dnaE	CYB_1663	CYB_1183	Identified by match to protein family HMM PF00436.	DNA polymerase III, alpha subunit; Identified by similarity to SP:O34623; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.	0.805
CYB_1663	dnaX	CYB_1663	CYB_1304	Identified by match to protein family HMM PF00436.	DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.810
CYB_1663	polA	CYB_1663	CYB_0126	Identified by match to protein family HMM PF00436.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.737
CYB_1663	priA	CYB_1663	CYB_2227	Identified by match to protein family HMM PF00436.	Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.	0.743
CYB_1663	rplU	CYB_1663	CYB_0742	Identified by match to protein family HMM PF00436.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.717
CYB_1663	rpsF	CYB_1663	CYB_1664	Identified by match to protein family HMM PF00436.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.908