STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB_1850Conserved hypothetical protein; Identified by similarity to GB:BAC08977.1. (126 aa)    
Predicted Functional Partners:
CYB_2877
CO2 hydration protein; Identified by match to protein family HMM TIGR01964.
  
     0.767
CYB_2574
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
  
     0.747
CYB_1810
CO2 hydration protein; Identified by match to protein family HMM TIGR01964.
  
     0.725
CYB_2562
Conserved hypothetical protein; Identified by similarity to GB:BAC07925.1.
  
     0.724
CYB_1173
Conserved hypothetical protein; Identified by similarity to PIR:AH1812.
  
     0.722
CYB_2839
Conserved hypothetical protein; Identified by similarity to GB:BAC10003.1.
  
     0.702
CYB_0156
Conserved hypothetical protein; Identified by similarity to GB:CAE22030.1.
  
     0.697
CYB_0882
Conserved hypothetical protein; Identified by similarity to GB:BAD80497.1.
  
     0.696
CYB_0413
Conserved hypothetical protein.
  
     0.687
CYB_2761
Conserved hypothetical protein.
  
     0.664
Your Current Organism:
Synechococcus sp. JA23Ba
NCBI taxonomy Id: 321332
Other names: Cyanobacteria bacterium Yellowstone B-Prime, S. sp. JA-2-3B'a(2-13), Synechococcus sp. JA-2-3B'a(2-13)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.