STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB_2565Conserved hypothetical protein. (131 aa)    
Predicted Functional Partners:
CYB_2585
Conserved hypothetical protein.
  
     0.766
CYB_2931
Conserved hypothetical protein; Identified by similarity to PIR:AE2462; match to protein family HMM PF04286.
  
     0.764
CYB_1311
Conserved hypothetical protein; Identified by similarity to GB:BAC09020.1.
  
     0.763
CYB_2248
Identified by match to protein family HMM TIGR02652.
  
     0.761
CYB_2423
Conserved hypothetical protein.
  
     0.760
CYB_0412
Putative molybdenum-dependent nitrogenase; Identified by match to protein family HMM PF06967.
  
     0.755
CYB_0945
Conserved hypothetical protein; Identified by similarity to GB:BAC92118.1.
  
     0.748
CYB_0754
Conserved hypothetical protein; Identified by similarity to PIR:AD1913.
  
     0.747
CYB_0713
Conserved hypothetical protein.
  
     0.746
CYB_1793
Conserved hypothetical protein; Identified by similarity to SP:P46204.
  
     0.746
Your Current Organism:
Synechococcus sp. JA23Ba
NCBI taxonomy Id: 321332
Other names: Cyanobacteria bacterium Yellowstone B-Prime, S. sp. JA-2-3B'a(2-13), Synechococcus sp. JA-2-3B'a(2-13)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.