STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX85953.1Predicted lipid carrier protein YhbT, contains SCP2 domain. (175 aa)    
Predicted Functional Partners:
SDX85967.1
Putative protease.
 
  
 0.983
SDX85980.1
Collagenase-like protease, PrtC family.
 
  
 0.976
SDX85930.1
Protein of unknown function.
 
     0.818
SDX85996.1
Uncharacterized protein involved in response to NO.
 
     0.712
SDY76915.1
Predicted N-acetyltransferase YhbS.
 
    0.523
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
      
 0.420
SDY76678.1
TldD protein.
      
 0.420
SDY86159.1
Uncharacterized protein involved in response to NO.
 
     0.416
SDY79950.1
Uncharacterized protein involved in response to NO.
 
     0.415
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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