STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX86099.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
SDX86070.1
Putative Holin-X, holin superfamily III.
 
     0.820
SDY35361.1
Membrane protein.
 
     0.724
SDX86053.1
Protein of unknown function.
 
     0.695
SDX86084.1
Hypothetical protein.
 
     0.659
SDY35321.1
Putative Holin-X, holin superfamily III.
  
     0.632
SDX86119.1
Sodium/proton antiporter, CPA1 family.
 
     0.588
SDY10850.1
Hypothetical protein.
  
     0.512
SDY35297.1
Hypothetical protein.
  
     0.489
SDY35337.1
Hypothetical protein.
  
     0.411
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.