STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY12748.1acyl-CoA dehydrogenase. (594 aa)    
Predicted Functional Partners:
SDY12851.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.975
SDY17094.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.946
SDY46266.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.943
SDY17110.1
Electron transfer flavoprotein beta subunit.
 
 
 0.912
SDY46846.1
Enoyl-CoA hydratase.
   
 0.798
SDY12807.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.782
SDX82471.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.780
SDY07757.1
methylglutaconyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.780
SDY60916.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.780
SDY49632.1
Acyl transferase domain-containing protein.
  
 
 0.778
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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