STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY19776.1Transcriptional regulator, GntR family. (216 aa)    
Predicted Functional Partners:
SDY45949.1
Transcriptional regulator, GntR family.
  
     0.774
SDX90278.1
Transcriptional regulator, GntR family.
  
     0.755
SDY39008.1
Transcriptional regulator, GntR family.
  
     0.748
SDX87145.1
DNA-binding transcriptional regulator, GntR family.
  
     0.745
SDY28411.1
Transcriptional regulator, GntR family.
  
     0.722
SDY19754.1
Hypothetical protein.
       0.596
SDY93683.1
Hypothetical protein.
  
     0.529
SDY19736.1
TIGR02300 family protein.
       0.430
SDY45344.1
Hypothetical protein.
  
     0.416
SDY01348.1
Acetolactate synthase, small subunit.
   
    0.412
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.