STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY16609.1Outer membrane protein OmpU. (337 aa)    
Predicted Functional Partners:
SDX85215.1
Phospholipid-binding lipoprotein MlaA.
    
 
 0.907
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.819
SDY16588.1
Tetratricopeptide repeat-containing protein.
 
     0.781
SDY16624.1
Protein of unknown function.
 
   
 0.734
SDY50468.1
Hypothetical protein.
  
     0.614
SDX90697.1
Uncharacterized conserved protein, contains FIST_N domain.
  
    0.603
SDY16581.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.575
SDY20668.1
Beta-barrel assembly machine subunit BamF.
  
     0.573
SDY22321.1
Lipid A oxidase.
   
 
 0.499
SDX82908.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
  
 
 0.497
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.