STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY17468.1Disulphide bond corrector protein DsbC. (267 aa)    
Predicted Functional Partners:
SDY17479.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
       0.731
SDX86495.1
TIGR02302 family protein.
  
     0.564
SDX87614.1
HemY protein.
  
     0.547
SDX95357.1
Transcriptional regulator, XRE family.
  
     0.496
SDX97815.1
Protein of unknown function.
  
     0.449
SDY93712.1
Outer membrane protein.
  
     0.441
SDY01155.1
Protein-disulfide isomerase.
 
   
 0.414
SDY17178.1
Methyltransferase domain-containing protein.
  
     0.412
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.