STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY41022.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
SDY16512.1
Outer membrane lipoprotein-sorting protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
    
 
 0.937
SDY64253.1
Outer membrane transport energization protein TonB.
  
 
   0.927
SDY36333.1
Cell division and transport-associated protein TolA.
    
   0.913
SDY18064.1
Hypothetical protein.
   
  
 0.791
SDX83296.1
Putative ABC transport system permease protein.
   
 
 0.727
SDX83401.1
Putative ABC transport system permease protein.
    
 
 0.707
SDY88986.1
Lipoprotein-releasing system permease protein.
    
 
 0.707
SDY41005.1
Hypothetical protein.
       0.550
SDY07150.1
Osmotically inducible protein OsmC.
   
    0.526
SDY55084.1
Hypothetical protein.
  
     0.518
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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