STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY56246.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
SDY56267.1
TRAP transporter, 4TM/12TM fusion protein.
 
 
  0.995
SDY56285.1
Transcriptional regulator, IclR family.
 
     0.919
SDY56343.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.902
SDY56307.1
Aminocarboxymuconate-semialdehyde decarboxylase.
 
     0.873
SDX82823.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.788
SDY57694.1
TRAP transporter, 4TM/12TM fusion protein.
 
     0.762
SDY56229.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
     0.745
SDY93003.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
  0.743
SDY74381.1
TRAP transporter, 4TM/12TM fusion protein.
 
    0.741
SDY56207.1
Hypothetical protein.
 
     0.738
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.