Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY56285.1 | SDY58357.1 | SAMN05444340_110142 | SAMN05444340_11137 | Transcriptional regulator, IclR family. | Transcriptional regulator, IclR family. | 0.637 |
SDY58207.1 | SDY58229.1 | SAMN05444340_11130 | SAMN05444340_11131 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | 0.877 |
SDY58207.1 | SDY58255.1 | SAMN05444340_11130 | SAMN05444340_11132 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.856 |
SDY58207.1 | SDY58297.1 | SAMN05444340_11130 | SAMN05444340_11134 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Peptide/nickel transport system permease protein. | 0.867 |
SDY58207.1 | SDY58321.1 | SAMN05444340_11130 | SAMN05444340_11135 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Peptide/nickel transport system permease protein. | 0.872 |
SDY58207.1 | SDY58333.1 | SAMN05444340_11130 | SAMN05444340_11136 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Peptide/nickel transport system substrate-binding protein. | 0.878 |
SDY58207.1 | SDY58357.1 | SAMN05444340_11130 | SAMN05444340_11137 | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | Transcriptional regulator, IclR family. | 0.668 |
SDY58229.1 | SDY58207.1 | SAMN05444340_11131 | SAMN05444340_11130 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.877 |
SDY58229.1 | SDY58255.1 | SAMN05444340_11131 | SAMN05444340_11132 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.821 |
SDY58229.1 | SDY58297.1 | SAMN05444340_11131 | SAMN05444340_11134 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Peptide/nickel transport system permease protein. | 0.806 |
SDY58229.1 | SDY58321.1 | SAMN05444340_11131 | SAMN05444340_11135 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Peptide/nickel transport system permease protein. | 0.822 |
SDY58229.1 | SDY58333.1 | SAMN05444340_11131 | SAMN05444340_11136 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Peptide/nickel transport system substrate-binding protein. | 0.785 |
SDY58229.1 | SDY58357.1 | SAMN05444340_11131 | SAMN05444340_11137 | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | Transcriptional regulator, IclR family. | 0.593 |
SDY58255.1 | SDY58207.1 | SAMN05444340_11132 | SAMN05444340_11130 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.856 |
SDY58255.1 | SDY58229.1 | SAMN05444340_11132 | SAMN05444340_11131 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03. | 0.821 |
SDY58255.1 | SDY58297.1 | SAMN05444340_11132 | SAMN05444340_11134 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide/nickel transport system permease protein. | 0.994 |
SDY58255.1 | SDY58321.1 | SAMN05444340_11132 | SAMN05444340_11135 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide/nickel transport system permease protein. | 0.967 |
SDY58255.1 | SDY58333.1 | SAMN05444340_11132 | SAMN05444340_11136 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Peptide/nickel transport system substrate-binding protein. | 0.893 |
SDY58255.1 | SDY58357.1 | SAMN05444340_11132 | SAMN05444340_11137 | Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Transcriptional regulator, IclR family. | 0.509 |
SDY58297.1 | SDY58207.1 | SAMN05444340_11134 | SAMN05444340_11130 | Peptide/nickel transport system permease protein. | Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase. | 0.867 |
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