STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY62600.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (319 aa)    
Predicted Functional Partners:
SDY62637.1
Peptide/nickel transport system permease protein.
  
  0.999
SDY62620.1
Peptide/nickel transport system ATP-binding protein/peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.996
SDY62664.1
Peptide/nickel transport system permease protein.
  
  0.996
SDY62678.1
Peptide/nickel transport system substrate-binding protein.
 
  
  0.992
SDY77334.1
Peptide/nickel transport system permease protein.
  
  0.979
SDY78618.1
Peptide/nickel transport system permease protein.
  
  0.962
SDY70409.1
Peptide/nickel transport system permease protein.
  
  0.958
SDY77488.1
Peptide/nickel transport system permease protein.
  
  0.958
SDY63761.1
Peptide/nickel transport system permease protein.
  
  0.948
SDY58297.1
Peptide/nickel transport system permease protein.
  
  0.940
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.