Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX86572.1 | SDY11855.1 | SAMN05444340_101227 | SAMN05444340_103300 | Thiol-disulfide isomerase or thioredoxin. | NADPH-glutathione reductase. | 0.901 |
SDX86572.1 | SDY20982.1 | SAMN05444340_101227 | SAMN05444340_104270 | Thiol-disulfide isomerase or thioredoxin. | 1-Cys peroxiredoxin. | 0.980 |
SDX86572.1 | SDY62246.1 | SAMN05444340_101227 | SAMN05444340_11283 | Thiol-disulfide isomerase or thioredoxin. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.859 |
SDX86572.1 | SDY82240.1 | SAMN05444340_101227 | SAMN05444340_11960 | Thiol-disulfide isomerase or thioredoxin. | Glutathione reductase (NADPH). | 0.901 |
SDX97277.1 | SDY11855.1 | SAMN05444340_102108 | SAMN05444340_103300 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | NADPH-glutathione reductase. | 0.901 |
SDX97277.1 | SDY20982.1 | SAMN05444340_102108 | SAMN05444340_104270 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 1-Cys peroxiredoxin. | 0.980 |
SDX97277.1 | SDY62246.1 | SAMN05444340_102108 | SAMN05444340_11283 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.859 |
SDX97277.1 | SDY82240.1 | SAMN05444340_102108 | SAMN05444340_11960 | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | Glutathione reductase (NADPH). | 0.901 |
SDY07801.1 | SDY11855.1 | SAMN05444340_10395 | SAMN05444340_103300 | Glutathione S-transferase. | NADPH-glutathione reductase. | 0.767 |
SDY07801.1 | SDY12787.1 | SAMN05444340_10395 | SAMN05444340_103344 | Glutathione S-transferase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.931 |
SDY07801.1 | SDY19015.1 | SAMN05444340_10395 | SAMN05444340_104169 | Glutathione S-transferase. | Glutathione S-transferase. | 0.859 |
SDY07801.1 | SDY20982.1 | SAMN05444340_10395 | SAMN05444340_104270 | Glutathione S-transferase. | 1-Cys peroxiredoxin. | 0.416 |
SDY07801.1 | SDY62246.1 | SAMN05444340_10395 | SAMN05444340_11283 | Glutathione S-transferase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.747 |
SDY07801.1 | SDY82240.1 | SAMN05444340_10395 | SAMN05444340_11960 | Glutathione S-transferase. | Glutathione reductase (NADPH). | 0.767 |
SDY07801.1 | gshB | SAMN05444340_10395 | SAMN05444340_104324 | Glutathione S-transferase. | Glutathione synthase; Belongs to the prokaryotic GSH synthase family. | 0.865 |
SDY11855.1 | SDX86572.1 | SAMN05444340_103300 | SAMN05444340_101227 | NADPH-glutathione reductase. | Thiol-disulfide isomerase or thioredoxin. | 0.901 |
SDY11855.1 | SDX97277.1 | SAMN05444340_103300 | SAMN05444340_102108 | NADPH-glutathione reductase. | Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE. | 0.901 |
SDY11855.1 | SDY07801.1 | SAMN05444340_103300 | SAMN05444340_10395 | NADPH-glutathione reductase. | Glutathione S-transferase. | 0.767 |
SDY11855.1 | SDY12787.1 | SAMN05444340_103300 | SAMN05444340_103344 | NADPH-glutathione reductase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.778 |
SDY11855.1 | SDY19015.1 | SAMN05444340_103300 | SAMN05444340_104169 | NADPH-glutathione reductase. | Glutathione S-transferase. | 0.768 |
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