STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY67792.1Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). (229 aa)    
Predicted Functional Partners:
SDX83909.1
Capsular exopolysaccharide family.
 
 
 0.977
SDX83677.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.975
SDY49743.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
 
 
 0.771
SDY49653.1
Hypothetical protein.
 
 0.688
SDY49779.1
Hypothetical protein.
 
  
 0.674
SDX84239.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.656
SDX87545.1
Polysaccharide export outer membrane protein.
  
 
 0.652
SDX89054.1
Polysaccharide export outer membrane protein.
  
 
 0.652
SDY40700.1
Polysaccharide export outer membrane protein.
  
 
 0.652
SDY66778.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.649
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.