STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY73075.1Fumarylpyruvate hydrolase. (226 aa)    
Predicted Functional Partners:
SDX90160.1
Maleylacetoacetate isomerase.
  
 
 0.936
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.882
SDY39816.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
  0.878
SDY39779.1
Succinate dehydrogenase subunit C.
  
 
  0.876
SDY39800.1
Succinate dehydrogenase subunit D.
   
 
  0.861
SDY20041.1
2,4-diketo-3-deoxy-L-fuconate hydrolase.
  
  
 
0.836
SDY88187.1
Fumarate reductase subunit C.
   
 
  0.829
SDY88164.1
Succinate dehydrogenase subunit C.
   
 
  0.828
SDX90077.1
Homogentisate 1,2-dioxygenase.
  
  
 0.797
SDY39853.1
Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
  0.750
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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