STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY72530.1Hypothetical protein. (213 aa)    
Predicted Functional Partners:
SDY72506.1
Hypothetical protein; Belongs to the UPF0434 family.
 
     0.872
SDY72547.1
Thioredoxin.
 
   
 0.862
SDY06619.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
    
 0.806
SDY22087.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
    
 0.806
SDY88774.1
AAA domain-containing protein.
    
 0.806
SDY82108.1
DNA repair exonuclease SbcCD nuclease subunit.
  
 
 0.768
SDY28598.1
Calcineurin-like phosphoesterase.
  
 
 0.767
SDY90174.1
Putative mRNA 3-end processing factor.
     
 0.736
SDY72567.1
Exodeoxyribonuclease-3.
       0.648
SDY18969.1
Glutamate synthase (NADPH) large subunit.
       0.452
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.