STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY77012.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG. (214 aa)    
Predicted Functional Partners:
SDY49632.1
Acyl transferase domain-containing protein.
  
 0.909
SDY18969.1
Glutamate synthase (NADPH) large subunit.
     
 0.855
SDY77031.1
Hypothetical protein.
       0.853
SDY68121.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
  
 0.775
SDY49677.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.739
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
 
  
 
 0.692
SDY11593.1
Choline-sulfatase.
   
 
 0.679
SDY11722.1
Ferredoxin, 2Fe-2S.
   
 0.669
SDX87253.1
6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
 
  0.658
SDY76993.1
Conserved hypothetical protein.
    
  0.651
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.