STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY82636.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
SDY82575.1
Cytochrome C oxidase, cbb3-type, subunit III.
       0.697
SDY82597.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
       0.697
SDY82619.1
Hypothetical protein.
       0.697
SDY82660.1
Protein SCO1/2.
       0.605
SDY82679.1
Hypothetical protein.
       0.605
SDY82694.1
Hypothetical protein.
       0.605
SDY82716.1
Cytochrome c-type biogenesis protein.
       0.605
SDY82517.1
Hypothetical protein.
       0.441
SDY82538.1
Uncharacterized conserved protein.
       0.441
Your Current Organism:
Citreimonas salinaria
NCBI taxonomy Id: 321339
Other names: C. salinaria, Citreimonas salinaria Choi and Cho 2006, DSM 26880, JCM 13036, KCCM 42116, Rhodobacteraceae bacterium CL-SP20, strain CL-SP20
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.